Encapsulation of charged halogens by the 512 water cage

dc.contributor.affiliationGómez, S., Scuola Normale Superiore, Classe di Scienze, Piazza dei Cavalieri 7, Pisa, 56126, Italy
dc.contributor.affiliationFlórez, E., Grupo de Materiales con Impacto, Mat&mpac, Facultad de Ciencias Básicas, Universidad de Medellín, Carrera 87 No. 30-65, Medellín, 050026, Colombia
dc.contributor.affiliationAcelas, N., Grupo de Materiales con Impacto, Mat&mpac, Facultad de Ciencias Básicas, Universidad de Medellín, Carrera 87 No. 30-65, Medellín, 050026, Colombia
dc.contributor.affiliationCappelli, C., Scuola Normale Superiore, Classe di Scienze, Piazza dei Cavalieri 7, Pisa, 56126, Italy
dc.contributor.affiliationHadad, C., Instituto de Química, Universidad de Antioquia UdeA, Calle 70 No. 52-21, Medellín, Colombia
dc.contributor.affiliationRestrepo, A., Instituto de Química, Universidad de Antioquia UdeA, Calle 70 No. 52-21, Medellín, Colombia
dc.contributor.authorGómez S
dc.contributor.authorFlórez E
dc.contributor.authorAcelas N
dc.contributor.authorCappelli C
dc.contributor.authorHadad C
dc.contributor.authorRestrepo A.
dc.date.accessioned2024-07-31T21:06:56Z
dc.date.available2024-07-31T21:06:56Z
dc.date.issued2024
dc.descriptionThis study focuses on the encapsulation of the entire series of halides by the 512 cage of twenty water molecules and on the characterization of water to water and water to anion interactions. State-of-the-art computations are used to determine equilibrium geometries, energy related quantities, and thermal stability towards dissociation and to dissect the nature and strength of intermolecular interactions holding the clusters as stable units. Two types of structures are revealed: heavily deformed cages for F− indicating a preference for microsolvation, and slightly deformed cages for the remaining anions indicating a preference for encapsulation. The primary variable dictating the properties of the clusters is the charge density of the central halide, with the most severe effects observed for the F− case. For the remaining halides, the anion may be safely viewed as a sort of “big electron” with little local disruptive power, enough to affect the network of non-covalent hydrogen bonds in the cage, but not enough to break it. Gibbs energies for dissociation either into cavity and halide or into water molecules and halide suggest that, in a similar way as to methane clathrate, a more weakly bonded complex that has been detected in the gas phase, all halide containing clathrate-like structures should be amenable to experimental detection in the gas phase at moderate temperature and pressure conditions. © 2024 The Royal Society of Chemistry.
dc.identifier.doi10.1039/d4cp01340a
dc.identifier.instnameinstname:Universidad de Medellínspa
dc.identifier.issn14639076
dc.identifier.reponamereponame:Repositorio Institucional Universidad de Medellínspa
dc.identifier.repourlrepourl:https://repository.udem.edu.co/
dc.identifier.urihttp://hdl.handle.net/11407/8417
dc.language.isoeng
dc.publisherRoyal Society of Chemistryspa
dc.publisher.facultyFacultad de Ciencias Básicasspa
dc.relation.isversionofhttps://www.scopus.com/inward/record.uri?eid=2-s2.0-85193601733&doi=10.1039%2fd4cp01340a&partnerID=40&md5=313d8bc4d11ec69ae3e9c8a16b6ec20d
dc.relation.referencesGomez, D.T., Pratt, L.R., Asthagiri, D.N., Rempe, S.B., (2022) Acc. Chem. Res., 55, pp. 2201-2212
dc.relation.referencesLikholyot, A., Hovey, J.K., Seward, T.M., (2005) Geochim. Cosmochim. Acta, 69, pp. 2949-2958
dc.relation.referencesHadad, C., Florez, E., Acelas, N., Merino, G., Restrepo, A., (2019) Int. J. Quantum Chem., 119, p. e25766
dc.relation.referencesRojas-Valencia, N., Gómez, S., Guerra, D., Restrepo, A., (2020) Phys. Chem. Chem. Phys., 22, pp. 13049-13061
dc.relation.referencesBajaj, P., Gotz, A.W., Paesani, F., (2016) J. Chem. Theory Comput., 12, pp. 2698-2705
dc.relation.referencesPerera, L., Berkowitz, M.L., (1992) J. Chem. Phys., 96, pp. 8288-8294
dc.relation.referencesFlórez, E., Gómez, S., Acelas, N., Hadad, C., Restrepo, A., (2022) ChemPhysChem, 23, p. e202200456
dc.relation.referencesGómez, S., Flórez, E., Acelas, N., Hadad, C., Restrepo, A., (2023) Phys. Chem. Chem. Phys., 25, pp. 12284-12289
dc.relation.referencesDavid, J., Gómez, S., Guerra, D., Guerra, D., Restrepo, A., (2021) ChemPhysChem, 22, pp. 2401-2412
dc.relation.referencesGómez, S., Gómez, S., David, J., Guerra, D., Cappelli, C., Restrepo, A., (2022) Molecules, 27, p. 8665
dc.relation.referencesRobertson, W.H., Johnson, M.A., (2003) Annu. Rev. Phys. Chem., 54, pp. 173-213
dc.relation.referencesRodríguez-Segundo, R., Gijón, A., Prosmiti, R., (2022) Phys. Chem. Chem. Phys., 24, pp. 14964-14974
dc.relation.referencesRodríguez-Segundo, R., Arismendi-Arrieta, D.J., Prosmiti, R., (2022) Molecules, 27, p. 1654
dc.relation.referencesWolke, C.T., Menges, F.S., Tötsch, N., Gorlova, O., Fournier, J.A., Weddle, G.H., Johnson, M.A., Knorke, H., (2015) J. Phys. Chem. A, 119, pp. 1859-1866
dc.relation.referencesArismendi-Arrieta, D.J., Riera, M., Bajaj, P., Prosmiti, R., Paesani, F., (2016) J. Phys. Chem. B, 120, pp. 1822-1832
dc.relation.referencesBajaj, P., Riera, M., Lin, J.K., Mendoza Montijo, Y.E., Gazca, J., Paesani, F., (2019) J. Phys. Chem. A, 123, pp. 2843-2852
dc.relation.referencesMallory, J.D., Mandelshtam, V.A., (2018) J. Phys. Chem. A, 122, pp. 4167-4180
dc.relation.referencesSun, S., Liu, Z., Colombo, F., Gao, R., Yu, Y., Qiu, Y., Su, J., Gan, L., (2022) Angew. Chem., Int. Ed., 61, p. e202212090
dc.relation.referencesGómez, S., Restrepo, A., (2019) Phys. Chem. Chem. Phys., 21, pp. 15815-15822
dc.relation.referencesCox, S.J., Towler, M.D., Alfe, D., Michaelides, A., (2014) J. Chem. Phys., 140, p. 174703
dc.relation.referencesGhosh, J., Methikkalam, R.R.J., Bhuin, R.G., Ragupathy, G., Choudhary, N., Kumar, R., Pradeep, T., (2019) Proc. Natl. Acad. Sci. U. S. A., 116, pp. 1526-1531
dc.relation.referencesLuspay-Kuti, A., Mousis, O., Hässig, M., Fuselier, S.A., Lunine, J.I., Marty, B., Mandt, K.E., Rubin, M., (2016) Sci. Adv., 2, p. e1501781
dc.relation.referencesChattaraj, P.K., Bandaru, S., Mondal, S., (2011) J. Phys. Chem. A, 115, p. 187
dc.relation.referencesWang, K., Li, W., Li, S., (2014) J. Chem. Theory Comput., 10, pp. 1546-1553
dc.relation.referencesBecke, A.D., (1997) J. Chem. Phys., 107, pp. 8554-8560
dc.relation.referencesGrimme, S., (2006) J. Comput. Chem., 27, pp. 1787-1799
dc.relation.referencesFlórez, E., Acelas, N., Gómez, S., Hadad, C., Restrepo, A., (2022) ChemPhysChem, 23, p. e202100716
dc.relation.referencesPeterson, K.A., Figgen, D., Goll, E., Stoll, H., Dolg, M., (2003) J. Chem. Phys., 119, pp. 11113-11123
dc.relation.referencesChamorro, Y., Flórez, E., Maldonado, A., Aucar, G., Restrepo, A., (2021) Int. J. Quantum Chem., 121, p. e26571
dc.relation.referencesChai, J.-D., Head-Gordon, M., (2008) Phys. Chem. Chem. Phys., 10, pp. 6615-6620
dc.relation.referencesMardirossian, N., Head-Gordon, M., (2017) Mol. Phys., 115, pp. 2315-2372
dc.relation.referencesBursch, M., Mewes, J.-M., Hansen, A., Grimme, S., (2022) Angew. Chem., Int. Ed., 61, p. e202205735
dc.relation.referencesRiplinger, C., Neese, F., (2013) J. Chem. Phys., 138, p. 34106
dc.relation.referencesRiplinger, C., Sandhoefer, B., Hansen, A., Neese, F., (2013) J. Chem. Phys., 139, p. 134101
dc.relation.referencesNeese, F., (2012) Wiley Interdiscip. Rev.: Comput. Mol. Sci., 2, pp. 73-78
dc.relation.referencesNeese, F., Wennmohs, F., Becker, U., Riplinger, C., (2020) J. Chem. Phys., 152, p. 224108
dc.relation.referencesNeese, F., (2018) Wiley Interdiscip. Rev.: Comput. Mol. Sci., 8, p. e1327
dc.relation.referencesLiakos, D.G., Sparta, M., Kesharwani, M.K., Martin, J.M.L., Neese, F., (2015) J. Chem. Theory Comput., 11, pp. 1525-1539
dc.relation.referencesPavošević, F., Peng, C., Pinski, P., Riplinger, C., Neese, F., Valeev, E.F., (2017) J. Chem. Phys., 146, p. 174108
dc.relation.referencesSchmitz, G., Elm, J., (2020) ACS Omega, 5, pp. 7601-7612
dc.relation.referencesGuo, Y., Riplinger, C., Becker, U., Liakos, D.G., Minenkov, Y., Cavallo, L., Neese, F., (2018) J. Chem. Phys., 148, p. 11101
dc.relation.referencesChan, B., Karton, A., (2022) J. Comput. Chem., 43, pp. 1394-1402
dc.relation.referencesHalkier, A., Helgaker, T., Jørgensen, P., Klopper, W., Koch, H., Olsen, J., Wilson, A.K., (1998) Chem. Phys. Lett., 286, pp. 243-252
dc.relation.referencesZhong, S., Barnes, E.C., Petersson, G.A., (2008) J. Chem. Phys., 129, p. 184116
dc.relation.referencesNeese, F., Valeev, E.F., (2011) J. Chem. Theory Comput., 7, pp. 33-43
dc.relation.referencesHelgaker, T., Klopper, W., Koch, H., Noga, J., (1997) J. Chem. Phys., 106, pp. 9639-9646
dc.relation.referencesAltun, A., Neese, F., Bistoni, G., (2020) J. Chem. Theory Comput., 16, pp. 6142-6149
dc.relation.referencesWappett, D.A., Goerigk, L., (2024) J. Phys. Chem. A, 128, pp. 62-72
dc.relation.referencesWeigend, F., Ahlrichs, R., (2005) Phys. Chem. Chem. Phys., 7, pp. 3297-3305
dc.relation.referencesRappoport, D., Furche, F., (2010) J. Chem. Phys., 133, p. 134105
dc.relation.referencesIzsák, R., Neese, F., (2011) J. Chem. Phys., 135, p. 144105
dc.relation.referencesHellweg, A., Hättig, C., Höfener, S., Klopper, W., (2007) Theor. Chem. Acc., 117, pp. 587-597
dc.relation.referencesMurillo, J., David, J., Restrepo, A., (2010) Phys. Chem. Chem. Phys., 12, pp. 10963-10970
dc.relation.referencesStošek, J., Semrád, H., Mazal, C., Munzarová, M., (2023) J. Phys. Chem. A, 127, pp. 6135-6146
dc.relation.referencesPopelier, P.L., (2000) Atoms in Molecules: An Introduction, , Prentice Hall London
dc.relation.referencesBader, R., (1990) Atoms in Molecules: A Quantum Theory, , Oxford Univ. press Oxford
dc.relation.referencesGrabowski, S.J., (2011) Chem. Rev., 111, pp. 2597-2625
dc.relation.referencesMatta, C., Boyd, R., Becke, A., (2007) The Quantum Theory of Atoms in Molecules: From Solid State to DNA and Drug Design, , Wiley
dc.relation.referencesWeinhold, F., Landis, C., Glendening, E., (2016) Int. Rev. Phys. Chem., 35, pp. 399-440
dc.relation.referencesReed, A.E., Curtiss, L.A., Weinhold, F., (1988) Chem. Rev., 88, pp. 899-926
dc.relation.referencesWeinhold, F., Landis, C.R., (2012) Discovering Chemistry with Natural Bond Orbitals, , Wiley-VCH Hoboken NJ p. 319
dc.relation.referencesDiLabio, G.A., Otero-De-la Roza, A., (2016) Noncovalent Interactions in Density Functional Theory, , John Wiley & Sons Ltd ch. 1 pp. 1-;97
dc.relation.referencesJohnson, E.R., Keinan, S., Mori-Sánchez, P., Contreras-García, J., Cohen, A.J., Yang, W., (2010) J. Am. Chem. Soc., 132, pp. 6498-6506
dc.relation.referencesGómez, S., Ramrez-Malule, H., Cardona-G, W., Osorio, E., Restrepo, A., (2020) J. Phys. Chem. A, 124, pp. 9413-9426
dc.relation.referencesRojas-Valencia, N., Gómez, S., Guerra, D., Restrepo, A., (2020) Phys. Chem. Chem. Phys., 22, pp. 13049-13061
dc.relation.referencesGómez, S.A., Rojas-Valencia, N., Gómez, S., Egidi, F., Cappelli, C., Restrepo, A., (2021) ChemBioChem, 22, pp. 724-732
dc.relation.referencesGómez, S.A., Rojas-Valencia, N., Gómez, S., Cappelli, C., Restrepo, A., (2022) ChemBioChem, 23, p. e202100393
dc.relation.referencesGómez, S., Rojas-Valencia, N., Gómez, S.A., Cappelli, C., Merino, G., Restrepo, A., (2021) Chem. Sci., 12, pp. 9233-9245
dc.relation.referencesGómez, S.A., Rojas-Valencia, N., Gómez, S., Lans, I., Restrepo, A., (2022) ChemBioChem, p. e202200351
dc.relation.referencesFrisch, M.J., Trucks, G.W., Schlegel, H.B., Scuseria, G.E., Robb, M.A., Cheeseman, J.R., Scalmani, G., Fox, D.J., (2016) Gaussian 16 Revision B.01, , Gaussian Inc. Wallingford CT
dc.relation.referencesGlendening, E.D., Badenhoop, J.K., Reed, A.E., Carpenter, J.E., Bohmann, J.A., Morales, C.M., Karafiloglou, P., Weinhold, F., (2018) NBO 7.0, , Theoretical Chemistry Institute University of Wisconsin Madison WI
dc.relation.referencesContreras-García, J., Johnson, E.R., Keinan, S., Chaudret, R., Piquemal, J.-P., Beratan, D.N., Yang, W., (2011) J. Chem. Theory Comput., 7, pp. 625-632
dc.relation.referencesKeith, T., (2019) AIMALL (version 19.10.12), , https://aim.tkgristmill.com, TK Gristmill Software Overland Park KS USA
dc.relation.referencesShannon, R.D., (1976) Acta Crystallogr., Sect. A: Cryst. Phys., Diffr., Theor. Gen. Crystallogr., 32, pp. 751-767
dc.relation.referencesEmsley, J., (1998) The Elements, , Clarendon Press
dc.relation.referencesKumar, P., Sathyamurthy, N., (2011) J. Phys. Chem. A, 115, pp. 14276-14281
dc.relation.referencesDeible, M.J., Tuguldur, O., Jordan, K.D., (2014) J. Phys. Chem. B, 118, pp. 8257-8263
dc.relation.referencesFlórez, E., Acelas, N., Ramírez, F., Hadad, C., Restrepo, A., (2018) Phys. Chem. Chem. Phys., 20, pp. 8909-8916
dc.rights.accessrightsinfo:eu-repo/semantics/restrictedAccess
dc.sourcePhysical Chemistry Chemical Physics
dc.sourcePhys. Chem. Chem. Phys.
dc.sourceScopus
dc.subjectDissociationeng
dc.subjectGas hydrateseng
dc.subjectGaseseng
dc.subjectHydrationeng
dc.subjectHydrogen bondseng
dc.subjectMoleculeseng
dc.subjectEnergyeng
dc.subjectEquilibrium geometrieseng
dc.subjectGas-phaseseng
dc.subjectHeavily deformedeng
dc.subjectIntermolecular interactionseng
dc.subjectMicrosolvationeng
dc.subjectPropertyeng
dc.subjectState of the arteng
dc.subjectWater cageeng
dc.subjectWater moleculeeng
dc.subjectNegative ionseng
dc.titleEncapsulation of charged halogens by the 512 water cageeng
dc.typearticle
dc.type.localArtículospa
dc.type.versioninfo:eu-repo/semantics/publishedVersion

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